BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G04SP1|AL426577
(845 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1656 0.0
>3x_Contig1793
Length = 40499
Score = 1656 bits (833), Expect = 0.0
Identities = 840/845 (99%)
Strand = Plus / Plus
Query: 1 aaacggattctctgttgactaaatattcttcttttgctcaaacaacaagttctkaaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 29024 aaacggattctctgttgactaaatattcttcttttgctcaaacaacaagttctgaaccgt 29083
Query: 61 cagtacaagaaacgcaattgcaggagaaactagagaagattctcaaccagagacaggaga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29084 caggacaagaaacgcaattgcaggagaaactagagaagattctcaaccagagacaggaga 29143
Query: 121 cagtkgaatctttacaaagaattkcagacagtgaaagtaatatatccacgtccaagctat 180
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 29144 cagtggaatctttacaaagaattgcagacagtgaaagtaatatatccacgtccaagctat 29203
Query: 181 cacagctacagcgccatagggaaacattacaagacaattggcaaacgttccgtgacattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29204 cacagctacagcgccatagggaaacattacaagacaattggcaaacgttccgtgacattc 29263
Query: 241 gctcctccatacaacaagaacgcaatcgccttaacctcttgttttcagtgaagaaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29264 gctcctccatacaacaagaacgcaatcgccttaacctcttgttttcagtgaagaaagatt 29323
Query: 301 tacaaaatagtgctagtgataatcaaaatgaatatattcaagatgaggctcggagagtcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29324 tacaaaatagtgctagtgataatcaaaatgaatatattcaagatgaggctcggagagtcg 29383
Query: 361 aaaattctcacacagtggtggattctttgatagaccaggcttatgawaccagagagcagt 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 29384 aaaattctcacacagtggtggattctttgatagaccaggcttatgaaaccagagagcagt 29443
Query: 421 tcatgtcacaacgagtgtttttacaaaggtctagtgacagaatcttacagactttgcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29444 tcatgtcacaacgagtgtttttacaaaggtctagtgacagaatcttacagactttgcaac 29503
Query: 481 acattcctttgattaataatgtgatatcaaagataaacactagaagaaagaagaatgctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29504 acattcctttgattaataatgtgatatcaaagataaacactagaagaaagaagaatgctg 29563
Query: 541 taatattggcatccttaatatcaatttgtatcttagtactattttttacagcataaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29564 taatattggcatccttaatatcaatttgtatcttagtactattttttacagcataaatag 29623
Query: 601 tatcaactgaggtaattaaaacttgataagatcactgttaatgctatgataggtacgtaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29624 tatcaactgaggtaattaaaacttgataagatcactgttaatgctatgataggtacgtaa 29683
Query: 661 ttcgttataaagggaagaatgcatttgtgtttgttctcatgcgcttctgtcactatgctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29684 ttcgttataaagggaagaatgcatttgtgtttgttctcatgcgcttctgtcactatgctt 29743
Query: 721 ttggatgaaatttggtcgggagtaggttgtttcttctgattcgaagattgtaggaatacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29744 ttggatgaaatttggtcgggagtaggttgtttcttctgattcgaagattgtaggaatacc 29803
Query: 781 tgtgctaggatttcttgtctttgaattcctcaatacgctcttgaaatggacttgtttgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29804 tgtgctaggatttcttgtctttgaattcctcaatacgctcttgaaatggacttgtttgtt 29863
Query: 841 ctcag 845
|||||
Sbjct: 29864 ctcag 29868
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6935
Number of Sequences: 1807
Number of extensions: 6935
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 845
length of database: 10,358,551
effective HSP length: 16
effective length of query: 829
effective length of database: 10,329,639
effective search space: 8563270731
effective search space used: 8563270731
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)